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catRAPID interactions with large RNAs

We developed two methods that allow fast and quantitative predictions of protein interactions with large RNAs

Global Score
The algorithm has been trained on PAR-/HITS-CLIP (Hafner et al. 2010) and validated on Xist interactions.

The algorithm has been calibrated on RBP interactomes studied by eCLIP assays (Van Nostrand et al. 2016) and allows high-throughput predictions on long intergenic non-coding RNAs.