Portal Home

catRAPID fragments

catRAPID fragments

This module is based on a procedure which involves division of polypeptide and nucleotide sequences into fragments followed by prediction of their interaction propensities.



 

Submission reference: 918435


Submission label (optional)

Protein sequence (FASTA format - min 50 aa)

RNA sequence (FASTA format - min 50 nt)

Fragmentation option

Protein and RNA ("Uniform" fragmentation)
Long RNA ("Weighted" fragmentation)


Email address (optional, used for notification)



Submission status:

Send submission



Sample data

Just trying it out? Pre-populate the form with: (Please, check that you do not have active proxies!)

FMRP autoregulation - The interaction between the FMR1 protein and its mRNA [Schaeffer et al., 2001]
SRSF1 and Xist RNA - The interaction between SRSF1 and the long noncoding RNA Xist [Royce-Tolland et al., 2010]